<%@page import="java.util.*"%> <%@page import="java.sql.*"%> <%@page import="java.io.*"%> <% String type=request.getParameter("error_msg"); %> SSMBS submit sequence
SSMBS Computing Server
A tool to locate upto five user-defined motifs in a particular order in amino acids and nucleotide sequences.

Directions
  • All sequences provided to the server must be in FASTA format.
  • Please visit READSEQ to convert the sequence(s) into FASTA format.
  • Users can enter either of protein or DNA/RNA sequence(s).

Modes of sequence input
  • The following three options are available to provide the sequence(s).
    <% if(type.equals("combined")) { out.print("Sequence File Error: Amino acid and nucleotide sequences cannot be present in the same file.
    "); }%>     <% if(type.equals("none")) { out.print("No sequence was found in the uploaded file.
    "); }%>
  • Upload a sequence file
    Select file to upload :-
  • Select sequence(s) from other databases (PDB, SWISS-PROT, PIR, GDB).
  • Copy and paste the sequence(s) in a box.

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